Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805188.1_cds_XP_016492641.1_8285
CDS Infomation

[gene=LOC107812119] [db_xref=GeneID:107812119] [protein=FRIGIDA-like protein 3] [protein_id=XP_016492641.1] [location=join(39629..40673,41771..41943,42175..42594)] [gbkey=CDS]
Sequence

ATGGAAGATACACAATCAGTTACGACACTGATGGACTCCACAACCTCGAAGATACAGCAG
CTACAGAAAGCATTTGCTGAGTTGGAAAGTCATCGTGCTGTTACGCTAAACCTGAAATGG
AAGCAGCTTGAAGAGCATTTTCATGGGCTTGAGAAGTCCTTGAAGAGGCGTTTCACTGAA
CTGGAAGATCAAGAGAAAGAGTTTGAAACAAAAATAGTTCAATCTAGAAAGATTTTGGAG
AAGCGTCAAGCAGCTGTTATCTCTAAGGAGCAAGCTTCACTTGAGAGTCTCCAAGAGAAA
AGAGATGCAGCAGTTTCTGCCATTACTATTGCTCTTGAGAAGCATAGGAAGCCGTATTCT
GTGGAACCTTCTTGTGAGGTGCAAGGTGGGCCGTCTATGTTTGAAGCAAAGCCCCTTGAT
TTCATACCACTTGAGAATAATAATACAGAGGATCATATCAAGCCTTTTAAGAATGATGTT
GGGGAAGTCAAGTTTTATCCAGAGTTAGTGAAGTTATGCCAAGACATGGACTCAGAAGGC
CTTCACAAATTTATATCAGACAATCGCAAGAACTTGGCTGCAGTAAGAGAAGAAATTCCA
CCTGCTTTAAGAGCTGCTGTTGATCCTGCCTTTTTGGTTCTGGACTCACTCAAGGGTTTC
TACCCGTCTGAAGTGTCAATTTCAGATGCTAAAAAAGATGCAAATCTTTTAGGTCTTCGC
CGAACTTGTATTATGCTGATGGAATGCCTTAGCATTTTATTAACGACCCTGGAAGTGGAT
TCTAGTTCATGTTTAATATCAGGAAGTGTAAAGGAACGTGCAAAAGCAATTGCTAAGGAG
TGGAAACCAAAGCTAGATGAGCTTGACGCTGATGCAAATAATGGGAATTCCTTGGAGGCT
CATGCATTCTTACAACTTCTAGCTACCTTCGGTATTAACTCCAACTTTAACCAGGAAGAC
CTGTACAAGCTGATACCGATGGTTTCTCGTCGTCGCCAAACAGCTGATCTCTGTCGTTCC
CTTGGACTGTCTGAGAGAATGCCAGGTGTTATTAACGTGTTGGTTAGTAATGGAAGACAT
ATAGATGCTGTTAATCTAGCTTTTGCTTTCGAGCTGACCGACCAGTTTTCACCTGTTTCA
CTACTAAAATCCTACTTGAATGAAGCAAGCAAAGTATCTTCACCTGTCAAATCTGGAAAT
GCATCACCTACTCCACAGAATGATGTCAATGAGAAACAGCTGACTGCGCTGAAGGCTGTG
ATTAAATGCATTGAAGAACATAAGCTTGACGCGCAGTACCCCGTGGATCCTCTCCAAAAA
AGGGTTCTCCAGCTGGAGAAAGAAAAAGCCGACAAGAAAAGGGCAACTGAAGTTGCCAAA
CCTCAACCCAAGAGACCTCGTGCCAATTGTGTAGGAAATGGAGCAGCTCGAGTCGCTAAC
GTTGCCACTGACAAGAACTTCTATGGTAGTAGAATGACCGATAGGTATCCTCACTACATG
TATGACCGACCATATGCTTACCCCATACCAACCGACACCCACGTCCCATCATTCCTTGGT
ACCCCCTACAGCCTTCCTCCTGGGCATGGCAACTTCTTTGGAAATGGCTACCATTACCAG
GCTACTTACCTGCACTGA

Peptide Sequence

PEP ID

XP_016492641.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 3 [Nicotiana tabacum]
Sequence

MEDTQSVTTLMDSTTSKIQQLQKAFAELESHRAVTLNLKWKQLEEHFHGLEKSLKRRFTE
LEDQEKEFETKIVQSRKILEKRQAAVISKEQASLESLQEKRDAAVSAITIALEKHRKPYS
VEPSCEVQGGPSMFEAKPLDFIPLENNNTEDHIKPFKNDVGEVKFYPELVKLCQDMDSEG
LHKFISDNRKNLAAVREEIPPALRAAVDPAFLVLDSLKGFYPSEVSISDAKKDANLLGLR
RTCIMLMECLSILLTTLEVDSSSCLISGSVKERAKAIAKEWKPKLDELDADANNGNSLEA
HAFLQLLATFGINSNFNQEDLYKLIPMVSRRRQTADLCRSLGLSERMPGVINVLVSNGRH
IDAVNLAFAFELTDQFSPVSLLKSYLNEASKVSSPVKSGNASPTPQNDVNEKQLTALKAV
IKCIEEHKLDAQYPVDPLQKRVLQLEKEKADKKRATEVAKPQPKRPRANCVGNGAARVAN
VATDKNFYGSRMTDRYPHYMYDRPYAYPIPTDTHVPSFLGTPYSLPPGHGNFFGNGYHYQ
ATYLH

Transcript Sequence

Gene sequence data has not been registered.